Up: Component summary Component

UtrSeq2Seeds

Generate seeds with 15bp (XXXXXXXQXXXXXXX) with each query loci in middle. Each seed file contains seeds from each UTR sequence.

Version 1.0
Bundle sequencing
Categories smallRNA
Authors Ping Chen (Ping.Chen@Helsinki.FI)
Issue tracker View/Report issues
Source files component.xml UtrSeq2Seeds.pl
Usage Example with default values

Inputs

Name Type Mandatory Description
utrseq CSV Mandatory Variant calls from UTR region.

Outputs

Name Type Description
seeds Array<CSV> An array of seeds.

Test cases

Test case Parameters IN
utrseq
OUT
seeds
case1 (missing) utrseq (missing)

Generated 2018-12-17 07:42:26 by Anduril 2.0.0