Up: Component summary Component

ImageSummary

Summarises a directory of images, with one line for each image. An optional mask can be used to calculate foreground/background properties.

Version 1.0
Bundle anima
Categories Image Analysis
Authors Ville Rantanen (ville.rantanen@helsinki.fi)
Issue tracker View/Report issues
Requires Matlab
Source files component.xml imagesummary.m execute.m
Usage Example with default values

Inputs

Name Type Mandatory Description
gray ImageList Mandatory A directory with grayscale image files.
mask ImageList Optional A directory with BW mask image files.
names ImageList Optional A directory with the original image files, for naming the table. If omitted, names from "gray" are used.

Outputs

Name Type Description
out CSV List of feature values.

Parameters

Name Type Default Description
percentile float 1 Intensity percentiles calculated from image. Both N and 100%-N will be calculated. Use values 0-100.
prefix string "" Prefix string for data headers in the result table. Used when reading the same images with multiple parameters and then joining the results.

Test cases

Test case Parameters IN
gray
IN
mask
IN
names
OUT
out
case1 properties gray mask (missing) out

case2 properties gray (missing) (missing) out

percentile=25


Generated 2018-12-11 07:42:05 by Anduril 2.0.0