Up: Component summary Component

CombinationMatrix

Compute the plate statistics for the plate survival assays and for dummy plates. It also plots colored matrices showing the distribution of luminascence intensities across the plate.

Version 1.0
Bundle dsrt
Categories Preprocessing Excel
Authors Chiara Facciotto (chiara.facciotto@helsinki.fi)
Requires R ; xlsx (R-package)
Source files component.xml CombinationMatrix.r
Usage Example with default values

Inputs

Name Type Mandatory Description
in Array<CSV> Mandatory Array of CSV with the measurements from each plate.

Outputs

Name Type Description
out BinaryFolder Folder containing combination data.
matrices BinaryFolder Folder containing combination matrix plots.
plots BinaryFolder Folder containing inhibition plots.

Parameters

Name Type Default Description
neg string "DMSO" Name of the negative control.
pos string "BzCl" Name of the positive control.

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