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Sequence Motif

Parent category Analysis
Description Sequence motif discovery and analysis
Component Version Inputs Outputs Description
JASPARMotif 2.0.3 IDs motifs, annotations Writes JASPAR motif matrices into a MotifSet directory.
Logo 1.6 motifs, annot, subset report Generates sequence logos for the given DNA motifs.
MEMERunner 1.2 sequences motifs, annot, report Finds enriched motifs from the given set of DNA sequences.
MotifMatch 1.7.1 motifs, sequence, seqSelection, bgIn, exclude hits, frequencies, bgOut Aligns the given motifs against the DNA sequencies.
RNAFold 1.0 sequence structure Predicts RNA secondary structure using Vienna RNA Package energy minimization function.

Generated 2019-01-14 07:42:05 by Anduril 2.0.0