Component |
Version |
Inputs |
Outputs |
Description |

AnnotateDrugs |
1.0 |
in, annotations |
out |
Annotate drug concentrations. |

CellGrowthAssay |
1.0 |
in |
out, plots |
Compute the plate statistics for the plate survival assays and for dummy plates. |

CombinationMatrix |
1.0 |
in |
out, matrices, plots |
Compute the plate statistics for the plate survival assays and for dummy plates. |

ControlsQCs |
1.0 |
in |
out, plots |
Compute the plate statistics for the plate survival assays and for dummy plates. |

CSV2Excel |
1.3 |
csv, csv2, csv3, csv4, csv5, csv6, csv7, csv8, csv9, array, style, refs |
excelFile |
Converts a file from CSV format to Excel 97 format. |

DSRTplots |
1.0 |
in, annotations |
out, normalized, plots, combined, scores |
Plots the inhibition curves for each screening experiments, combine plots for different pretreatment times and computes
the scores indicating the efficacy of each drug. |

Excel2CSV |
1.0 |
in |
out |
Converts a Microsoft Excel sheet to a CSV file. |

Excel2Text |
0.1 |
in |
out |
Converts an Excel 97 xls-sheet to a text file. |

MicroplateReader |
1.0 |
in, annotations |
out |
Reads multiple XLSX files generated by a fluorescence/luminescence reader for a 96 or 384 well plate and
converts it into a tab-delimitted CSV file with the correct annotations for each well. |

PlateQCs |
1.0 |
in |
out, plots |
Compute the plate statistics for the plate survival assays and for dummy plates. |

SignificantCurves |
1.0 |
in |
out, plots, auc |
Selects drugs based on their efficacy scores. |